I'm -probably- going to hate the answer to the question (since I suspect all my armies have been using the wrong interpretation till now). Are the 'extra' traits you can buy at the cost of some extra points during creation of a class (usually L2 and up) considered 'bonus' traits, and therefore not count towards a class' maximum amount of traits?
I was under the impression this was the case because of the word 'extra', but recently had the realization this may actually not be the case.